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EMBO Practical Course

Light sheet microscopy

11 – 22 August 2025 | Dresden, Germany

  • Registration Deadline
  • 30 April 2025
  • Abstract Submission Deadline
  • 30 April 2025
  • Chosen Participants Will Be Notified By
  • 31 May 2025
  • Payment Deadline
  • 31 July 2025

Apply now!

Use #EMBOlsm

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About the Practical Course

Practical Course illustration

Light sheet microscopy is a technology that enables near-isotropic imaging of large biological specimens over time. It opens new avenues to study biological processes with unprecedented imaging speed or full coverage of entire organs and organisms. Light sheet microscopy is already broadly available through commercial imaging platforms, while the technology developers in academia push the boundaries of what is possible in biological imaging. The life science research community is highly interested in exploiting the power of light sheets to answer biological questions. However, researchers require advanced training to meet the technological and computational challenges associated with the light sheet microscopy paradigm. Therefore, we must continue with Practical Courses that teach new users the tools to use this exciting imaging technology effectively. Among the tools are innovative sample mounting approaches, big data image processing, and AI-powered image analysis of the data. Our course provides the participants with a comprehensive overview of light sheet microscopy design, sample preparation, operation, data processing, and image analysis. We achieve that by bringing together microscopists, physicists, computer science experts, experienced light sheet instructors, and leading light sheet companies to image the diverse samples brought in by the course participants.


About EMBO Courses and Workshops

EMBO Courses and Workshops are selected for their excellent scientific quality and timelines, provision of good networking activities for all participants and speaker gender diversity (at least 40% of speakers must be from the underrepresented gender).

Organisers are encouraged to implement measures to make the meeting environmentally more sustainable.

 

Speakers

 

Programme

 

Registration

  • Registration Deadline
  • 30 April 2025
  • Abstract Submission Deadline
  • 30 April 2025
  • Chosen Participants Will Be Notified By
  • 31 May 2025
  • Payment Deadline
  • 31 July 2025

 

  • STUDENT/POSTDOCS EUR 550
  • ACADEMIC EUR 550
  • INDUSTRY EUR 1,100

Registration includes:

  • Access to all lectures and practicals
  • Materials
  • Course brochure
  • Accommodation (shared rooms), including breakfast
  • Lunches and dinners
  • Refreshments during breaks
  • Wi-Fi

Payment

Participants are expected to pay the corresponding registration fee via direct bank transfer to the MPI-CBG. Paypal would be another option, if needed.

Selected participants will receive detailed information by e-mail.

Selection criteria

The main idea of this practical course is to learn light sheet microscopy by solving the participants’ current scientific questions during the course. Therefore, applicants who define an experiment that can be performed within the course timeframe will be strongly preferred. The organizers will choose projects that can be realized with the available technologies and the MPI-CBG infrastructure for organoids, Drosophila, zebrafish, mice, and invertebrate non-model systems. The organizers select participants to establish four interdisciplinary teams, ideally of two biologists, one computer scientist, and one physicist. The instructors will provide the missing expertise in a team when necessary. These teams will tackle the most interesting research problems proposed by the participants during the course. We will strive for good gender balance, maximal geographic diversity (e.g. 16 countries), and prioritize junior people (students, facility personnel, postdocs, young PIs). We reserve 4 of the 16 slots for EU13 countries, limit overseas participants to
2-3, and aim for 4 people involved in running imaging facilities.

The applicants are required to write a short, one-page motivation letter, where they:

  1. describe their educational background,
  2. summarize their skill set in biology, computer science and microscopy,
  3. and propose a concise imaging experiment that could benefit from light sheet microscopy.

Additionally, the applicants should submit their CV, publication record and summary of open access activities (websites, github, social media).

Abstract guidelines

In the abstract, the applicants should describe their current research.

Poster specifications

Participants are required to bring a poster that will be displayed throughout the course.

Measurements: Standard

Travel grants and registration fee waivers

Travel grants and registration fee waivers are available for participants.

Selection of awardees is handled directly by the organizers. EMBO travel grants and registration fee waivers are allocated on the basis of the quality of the submitted abstract.

Applicants do not need to apply separately for these but should indicate on the registration form if they wish to be considered.

Additional travel grants are available for EMBC Associate Member States Chile, India, Singapore and Taiwan.

Child care grants

EMBO Courses and Workshops offers grants to offset additional childcare costs incurred by participants or speakers when participating at any EMBO Courses and Workshop funded meeting. Eligible costs include fees for a caregiver or child-care facility, travel costs for a caregiver, or travel costs for taking the child to the meeting etc. Please indicate on the registration form whether you would like to be considered for the grant. Please also describe how you intend to use the childcare grant and specify the sum that you will need.

Sustainability measures at the meeting

The venue takes energy efficiency measures and is well connected by public transport.

Train travel on the whole will be encouraged. In addition, we will encourage the participants to use rental bicycles to move around Dresden and to/from the social events.

Catering will include vegetarian days, locally sourced ingredients, and no bottled water. Single-use wares will not be provided.

Accesibility grants

EMBO offers accessibility grants to support participants at EMBO Courses & Workshops with any access needs. These grants cover up to 500 euros for any additional costs e.g. to adapt the conference environment, or to be accompanied by someone to assist them where necessary.

Participants with access needs may apply for a grant via the registration system of the related EMBO event, or by emailing the organizers of the related EMBO event directly.


Code of conduct

Anti-harassment and non-discrimination policy

At EMBO, we believe that harassment and discriminatory behaviour are unacceptable in any setting.

Media and communications policy

Recording or communication of the presented data needs to be agreed upon by all concerned.

EMBO's code of conduct is applicable for all participants of this EMBO meeting and can be found here.

 

Contact

Erika Ylagan & Sandy Schneider

EMBO-LSM-2025@mpi-cbg.de
+49 351 2102949

 

 

Venue

Max Planck Institute of Molecular Cell Biology and Genetics

Pfotenhauerstr. 108
01307 Dresden
Germany

Accommodation

The participants and the instructors will be accommodated in nearby hotels. The hotels are within easy walking distance (20 minutes) and provide breakfast.

Two participants will share a room unless specifically requested not to.

Transport

Both the institute and accommodation are about 10 km from Dresden International Airport and 5 km from the main train station. The train stations in Dresden have both good train and bus connections from all over Europe, including direct trains to Berlin Airport. Local trams are also very reliable.

Please visit this website for more detailed travel routes.

About the Area

Dresden is a vibrant city in eastern Germany, known for its rich history, stunning architecture, and thriving scientific community. The city is home to iconic landmarks such as the Frauenkirche, Zwinger Palace, and the Semper Opera House, alongside world-class museums like the Dresden State Art Collections and the Albertinum. Nature lovers can enjoy the picturesque landscapes along the Elbe river or explore the nearby Saxon Switzerland National Park. Home to the prestigious Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG), Dresden has become a dynamic hub for cutting-edge research in cell biology, genetics, and biomedical sciences. Its robust scientific ecosystem fosters innovation, making it a key player in both European and global research networks.

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